Commit 1804da1e authored by Tiago Peixoto's avatar Tiago Peixoto
Browse files

Add entry 'software_dependencies'

parent e671ead3
#! /usr/bin/env python
# -*- coding: utf-8 -*-
#
# Copyright (C) 2021 Tiago de Paula Peixoto <tiago@skewed.de>
#
# This program is free software: you can redistribute it and/or modify it under
# the terms of the GNU Affero General Public License as published by the Free
# Software Foundation, either version 3 of the License, or (at your option) any
# later version.
#
# This program is distributed in the hope that it will be useful, but WITHOUT
# ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS
# FOR A PARTICULAR PURPOSE. See the GNU Affero General Public License for more
# details.
#
# You should have received a copy of the GNU Affero General Public License along
# with this program. If not, see <http://www.gnu.org/licenses/>.
from .. import *
title = "Software dependencies (2010)"
description = """""Several networks of software dependencies. Nodes represent libraries and a directed edge denotes a library dependency on another.""[^icon]
[^icon]: Description obtained from the [ICON](https://icon.colorado.edu) project."""
tags = ['Technological', 'Software', 'Unweighted']
url = 'http://wwwlovre.appspot.com/support.jsp'
citation = [('Šubelj & Bajec (2012). Software systems through complex networks science, Proc. of SoftwareMining 12, p. 9','http://dx.doi.org/10.1145/2384416.2384418'),
('Šubelj & Bajec (2011). Community structure of complex software systems, Physica A 390(16), 2968','http://dx.doi.org/10.1016/j.physa.2011.03.036'),
('Šubelj et al. (2013). Group extraction for real-world networks, Proc. of NetSci 13, p. 152.','http://netsci2013.net/wordpress/wp-content/uploads/2013/05/booklet_NetSci_2013_forWeb_2.pdf'),
('Šubelj & Bajec (2012). Software systems through complex networks science, Proc. of SoftwareMining 12, p. 9','http://dx.doi.org/10.1145/2384416.2384418'),
('Šubelj & Bajec (2012). Clustering assortativity, communities and functional modules in real-world networks, pp. 21.','http://arxiv.org/abs/1202.3188'),
('Šubelj et al. (2014). Node mixing and group structure of complex software networks, Advs. Complex Syst. 17(7), 1450022.', 'http://dx.doi.org/10.1142/S0219525914500222')]
icon_hash = ['589b6485a411221d0e7c67d4', '58a4c628a411221d0e7c67e8', '58a4c586a411221d0e7c67e7']
ustream_license = None
upstream_prefix = 'http://wwwlovre.appspot.com/resources/research/networks'
nets = ['other/jdk', 'ssa/jung-j', 'ssc/javax', 'ssc/java', 'cmhs/slucene',
'ssa/weka', 'ssa/jung-c', 'ncs/guava', 'ssc/org', 'ssc/colt',
'ssc/jung', 'sgs/sjung', 'ssc/flamingo', 'cmhs/scolt', 'ssc/jmail',
'sgs/sjbullet', 'ssc/junit']
files = [(net, net.split("/")[1], None) for net in nets]
def fetch_upstream(force=False):
return fetch_upstream_files(__name__.split(".")[-1], upstream_prefix, files,
force)
@cache_network()
@coerce_props()
@annotate()
def parse(alts=None):
global files
name = __name__.split(".")[-1]
for fnames, alt, fmt in files:
if alts is not None and alt not in alts:
continue
if isinstance(fnames, str):
fnames = [fnames]
with ExitStack() as stack:
fs = [stack.enter_context(open_upstream_file(name, fn, "r")) for fn in fnames]
g = Graph(directed=True)
for line in fs[0]:
if "#" in line:
continue
vals = line.split()
if len(vals) == 1 and int(vals[0]) >= g.num_vertices():
g.add_vertex(int(vals[0]) - g.num_vertices() + 1)
if len(vals) > 1:
g.add_edge(int(vals[0]), int(vals[1]))
yield alt, g
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