Commits · d8bfcd42989387213eb345a23bb00bee9082cbbf · Tiago Peixoto / graph-tool · GitLab

21 Apr, 2016 1 commit
- is_bipartite(): add option 'find_odd_cycle' · d8bfcd42
  Tiago Peixoto authored Apr 21, 2016
  
  d8bfcd42
20 Apr, 2016 3 commits
- Change default in MulticanonicalState.get_flatness() · eb8e7f10
  Tiago Peixoto authored Apr 20, 2016
  
  eb8e7f10
- Implement draw.planar_layout() · 3805add7
  Tiago Peixoto authored Apr 20, 2016
  
  3805add7
- tsp_tour(): raise exception for directed graphs · a3eae6a3
  Tiago Peixoto authored Apr 20, 2016
```
This closes issue #293
```
  a3eae6a3
19 Apr, 2016 1 commit
- Fix typo bug in mcmc_anneal() · 91843211
  Tiago Peixoto authored Apr 19, 2016
  
  91843211
18 Apr, 2016 1 commit
- test_inference_mcmc.py: increase equilibration time · 2c1bc95f
  Tiago Peixoto authored Apr 18, 2016
  
  2c1bc95f
17 Apr, 2016 3 commits
- test_inference_mcmc.py: Switch to a smaller network to guarantee speedy equilibration · 7c0c4ac7
  Tiago Peixoto authored Apr 17, 2016
  
  7c0c4ac7
- MulticanonicalState: fix issue with histogram flat · 7b4b5618
  Tiago Peixoto authored Apr 17, 2016
  
  7b4b5618
- test_inference_mcmc.py: increase statistics · 05becca9
  Tiago Peixoto authored Apr 17, 2016
  
  05becca9
16 Apr, 2016 7 commits
- inference: make use of uniform_sample() · 6c3d1149
  Tiago Peixoto authored Apr 17, 2016
  
  6c3d1149
- test_inference_mcmc.py: decrease probability of false negatives · 95e1e194
  Tiago Peixoto authored Apr 16, 2016
  
  95e1e194
- test_inference_mcmc.py: include Gibbs sampling · b4e25c3d
  Tiago Peixoto authored Apr 16, 2016
  
  b4e25c3d
- Bump version to 2.17dev · e837dcc3
  Tiago Peixoto authored Apr 16, 2016
  
  e837dcc3
- Bump version to 2.16 · 386af122
  Tiago Peixoto authored Apr 16, 2016
  
  386af122
- Fix bug in BlockState.{remove/add}_vertex() · fc5f379c
  Tiago Peixoto authored Apr 16, 2016
  
  fc5f379c
- Documentation and test fixes · 9cc5cb2f
  Tiago Peixoto authored Apr 16, 2016
  
  9cc5cb2f
15 Apr, 2016 3 commits
- Bump version to 2.15 · 0dc50885
  Tiago Peixoto authored Apr 16, 2016
  
  0dc50885
- inference: implement extensive detailed balance tests · 8122cdcf
  Tiago Peixoto authored Apr 15, 2016
  
  8122cdcf
- inference: fix bug in detailed balance enforcement · 2f3b46a9
  Tiago Peixoto authored Apr 15, 2016
  
  2f3b46a9
14 Apr, 2016 3 commits
- multicanonical_equilibrate(): small improvements · 2b0a9da7
  Tiago Peixoto authored Apr 14, 2016
  
  2b0a9da7
- multicanonical_equilibrate(): add "allow_gaps" option · 2085f45a
  Tiago Peixoto authored Apr 14, 2016
  
  2085f45a
- inference: fix potential issue with get_move_prob() · 0aee04a4
  Tiago Peixoto authored Apr 14, 2016
  
  0aee04a4
13 Apr, 2016 4 commits
- Improve docstrings · 952d299b
  Tiago Peixoto authored Apr 13, 2016
  
  952d299b
- Implement BlockState.exhaustive_sweep() · 1475dc43
  Tiago Peixoto authored Apr 13, 2016
  
  1475dc43
- Allow for multiple simultaneous vertex movements in BlockState.move_vertex() · 30e6b8a0
  Tiago Peixoto authored Apr 13, 2016
  
  30e6b8a0
- Fix python-exposed boost::coroutine iteration · 2dfe4f33
  Tiago Peixoto authored Apr 13, 2016
```
This preserves the synchrony between global states and the iteration
sequence.
```
  2dfe4f33
12 Apr, 2016 3 commits
- inference: implement stricter checking for unexpected keyword arguments · 8037d8d5
  Tiago Peixoto authored Apr 12, 2016
  
  8037d8d5
- graph_distance_sampled.hh: improve performance · 8eef438b
  Tiago Peixoto authored Apr 12, 2016
  
  8eef438b
- Fix bug in GraphAdaptor's in_edges() · 0c92adbd
  Tiago Peixoto authored Apr 12, 2016
  
  0c92adbd
11 Apr, 2016 4 commits
- Improve iteration over out-/in-neighbours · 936e7260
  Tiago Peixoto authored Apr 11, 2016
  
  936e7260
- vertex_similarity(): Small fixes to docstring · 9e41e054
  Tiago Peixoto authored Apr 11, 2016
  
  9e41e054
- draw.random_layout(): Remove Numpy warning · cd8a85bb
  Tiago Peixoto authored Apr 11, 2016
  
  cd8a85bb
- Implement topology.vertex_similarity() · e173b204
  Tiago Peixoto authored Apr 11, 2016
```
This fixes issue #287
```
  e173b204
10 Apr, 2016 4 commits
- Fix MulticanonicalState.get_allowed_energies() · 058b172a
  Tiago Peixoto authored Apr 10, 2016
  
  058b172a
- multicanonical_equilibrate(): improve refinement · 53061723
  Tiago Peixoto authored Apr 10, 2016
  
  53061723
- multicanonical_equilibrate(): Use both extrema to guarantee histogram flatness · 040f4f48
  Tiago Peixoto authored Apr 10, 2016
  
  040f4f48
- Improve initialization speed of BlockState.{mcmc,gibbs,multicanonical}_sweep · 2a058f62
  Tiago Peixoto authored Apr 10, 2016
  
  2a058f62
09 Apr, 2016 3 commits
- MulticanonicalState: improve flatness criterium · c143f91d
  Tiago Peixoto authored Apr 09, 2016
  
  c143f91d
- blockmodel.py: docstring and test fixes · 6e6c375c
  Tiago Peixoto authored Apr 09, 2016
  
  6e6c375c
- multicanonical_loop.hh: check for out-of-bounds condition · 8455d1d4
  Tiago Peixoto authored Apr 09, 2016
  
  8455d1d4