Commits · c5ba81b94e219cf973106423024c7a45e7661bb3 · Tiago Peixoto / graph-tool

20 May, 2022 1 commit
- NestedBlockModel: query state.get_N() instead of state.g.num_vertices() · c5ba81b9
  Tiago Peixoto authored Feb 03, 2022
  
  c5ba81b9
02 Jan, 2022 1 commit
- doctests: fix double execution and references · af64085d
  Tiago Peixoto authored Jan 02, 2022
  
  af64085d
01 Jan, 2022 1 commit
- Update copyright information · 3b8a8c5c
  Tiago Peixoto authored Jan 01, 2022
  
  3b8a8c5c
03 Sep, 2021 1 commit
- inference: remove __deepcopy__() from state objects · e7a702bb
  Tiago Peixoto authored Sep 01, 2021
  
  e7a702bb
02 Jul, 2021 2 commits
- NestedBlockState: remove 'sampling' parameter · 03a8fa2c
  Tiago Peixoto authored Jul 02, 2021
  
  03a8fa2c
- inference: remove outdated functions and function parameters · d90b4d8b
  Tiago Peixoto authored Jul 02, 2021
  
  d90b4d8b
28 Jun, 2021 2 commits
- get_hierarchy_tree(): change default to empty_branches=False · 75556a9a
  Tiago Peixoto authored Jun 28, 2021
  
  75556a9a
- inference: fix issue with clabel in multilevel MCMC · 7be93ef4
  Tiago Peixoto authored Jun 28, 2021
```
This fixes issue #706
```
  7be93ef4
22 Jun, 2021 4 commits
- Fix mulicanonical_mcmc_sweep() with NestedBlockState · 6a2c8b3a
  Tiago Peixoto authored Jun 21, 2021
```
This fixes issue #699
```
  6a2c8b3a
- Fix docstrings · bab2be6b
  Tiago Peixoto authored Jun 21, 2021
  
  bab2be6b
- Implement nested_contiguous_map() · ea4ff28f
  Tiago Peixoto authored Jun 21, 2021
  
  ea4ff28f
- Change continuous_map() to contiguous_map() · e4cb3500
  Tiago Peixoto authored Jun 15, 2021
  
  e4cb3500
21 Jun, 2021 1 commit

Refactor mutilevel MCMC inference · f804c544

Tiago Peixoto authored Jun 15, 2021

This moves the entire algorithm into C++, and includes a faster
initialization heuristic.

f804c544

15 Jun, 2021 1 commit
- Refactor multilevel MCMC into pure C++ · c4ff6d79
  Tiago Peixoto authored Jun 07, 2021
  
  c4ff6d79
06 Feb, 2021 1 commit
- Use collections.abc.Iterable instead of collections.Iterable · f930bce1
  Alex Henrie authored Feb 06, 2021
  
  f930bce1
09 Jan, 2021 2 commits
- Update copyright information · 64f6945d
  Tiago Peixoto authored Jan 09, 2021
  
  64f6945d
- Implement latent triadic closure · f7a38bba
  Tiago Peixoto authored Jan 08, 2021
  
  f7a38bba
15 Sep, 2020 1 commit
- Fix initialization of overlapping NestedBlockState · dbc8e6f4
  Tiago Peixoto authored Sep 15, 2020
```
This fixes issue #678
```
  dbc8e6f4
08 Jun, 2020 1 commit
- Change license from GPL3 to LGPL3 · 2c87c01d
  Tiago Peixoto authored Jun 07, 2020
  
  2c87c01d
29 May, 2020 1 commit
- Implement partition modes, centroid and manipulation functions · 100f01d4
  Tiago Peixoto authored Apr 10, 2020
  
  100f01d4
18 May, 2020 1 commit
- Remove unused imports · 67f7464d
  Alex Henrie authored May 17, 2020
  
  67f7464d
02 Apr, 2020 1 commit
- Remove deprecated Python 2 compatibility · 77c95cc2
  Tiago Peixoto authored Apr 02, 2020
  
  77c95cc2
01 Apr, 2020 1 commit
- Turn off escape sequences in docstrings · 5d5f626d
  Alex Henrie authored Apr 01, 2020
  
  5d5f626d
22 Mar, 2020 4 commits
- Update copyright information · 97c70930
  Tiago Peixoto authored Mar 22, 2020
  
  97c70930
- Update documentation · 557588b1
  Tiago Peixoto authored Mar 22, 2020
  
  557588b1
- multiflip_mcmc(): fix detailed balance · ac607229
  Tiago Peixoto authored Mar 08, 2020
  
  ac607229
- blockmodel: change paramter 'max_BE' to a more explicit 'dense_bg' · 70f6e1bd
  Tiago Peixoto authored Mar 01, 2020
  
  70f6e1bd
02 Mar, 2020 2 commits
- inference: NestedBlockState constructor defaults to sampling=True · 2a175140
  Tiago Peixoto authored Jan 07, 2020
  
  2a175140
- hierarchy_minimize(): Fix NameError when the caller supplies a hierarchy that... · 8062aa44
  Stuart Berg authored Jan 30, 2020 and Tiago Peixoto committed Mar 02, 2020
```
hierarchy_minimize(): Fix NameError when the caller supplies a hierarchy that is missing the top level
```
  8062aa44
20 Oct, 2019 1 commit
- blockmodel: change set_blocks() to set_state() · 2fe5bab4
  Tiago Peixoto authored Sep 27, 2019
  
  2fe5bab4
14 Sep, 2019 1 commit
- General improvements to multiflip and gibbs mcmc · be0fc677
  Tiago Peixoto authored Aug 25, 2019
  
  be0fc677
19 Aug, 2019 1 commit
- inference: remove 'allow_empty' option · 878fb5b6
  Tiago Peixoto authored Aug 19, 2019
  
  878fb5b6
05 Jun, 2019 1 commit
- Update copyright information · 084f6cf3
  Tiago Peixoto authored Jun 05, 2019
  
  084f6cf3
26 May, 2019 1 commit
- Documentation improvements and fixes · 3512df30
  Tiago Peixoto authored Apr 27, 2019
  
  3512df30
19 Jul, 2018 1 commit
- NestedBlockState: Remove uncessary filter synchronization · 41bae98c
  Tiago Peixoto authored Jul 19, 2018
```
This fixes issue #495.
```
  41bae98c
26 Jun, 2018 1 commit
- Docstring cross-reference cleanup · d70825df
  Tiago Peixoto authored Jun 26, 2018
  
  d70825df
06 Apr, 2018 1 commit
- uncertain_blockmodel: Fix issue with clear_egroups() · 4186030c
  Tiago Peixoto authored Apr 06, 2018
  
  4186030c
11 Mar, 2018 2 commits
- Fix doctests · ed348374
  Tiago Peixoto authored Mar 11, 2018
  
  ed348374
- inference.blockmodel: Improve nested SBM equilibration · 4f0c7fe6
  Tiago Peixoto authored Feb 10, 2018
```
This modifies the MCMC code to allow simultaneous update of
all hierarchy levels, improving equilibration speed.
```
  4f0c7fe6
14 Feb, 2018 1 commit
- Update copyright date · 8f16e8ff
  Tiago Peixoto authored Feb 11, 2018
  
  8f16e8ff