Commits · bdfa296b7f059c84fa7b7c5d5996e8a2e6a18e2c · Tiago Peixoto / graph-tool

20 Aug, 2015 1 commit
- blockmodel.py: Improve hash performance via edge lookup cache · bdfa296b
  Tiago Peixoto authored Aug 20, 2015
  
  bdfa296b
19 Aug, 2015 3 commits
- (*)_blockmodel.py: Improve memory usage by clearing cache more frequently · 9b659850
  Tiago Peixoto authored Aug 19, 2015
  
  9b659850
- Implement __copy__ and __deepcopy__ for Nested/Overlap/Covariate/BlockState · f44436b4
  Tiago Peixoto authored Aug 19, 2015
  
  f44436b4
- blockmodel.py: Fix pmap() and reverse_map() for filtered property maps · f2acf0b1
  Tiago Peixoto authored Aug 19, 2015
  
  f2acf0b1
15 Aug, 2015 1 commit
- graph_blockmodel.hh: Improve log/gamma cache memory use and improve edge lookup performance · 33b9efb0
  Tiago Peixoto authored Aug 15, 2015
  
  33b9efb0
14 Aug, 2015 1 commit
- (Nested)BlockState: fix preservation of "ignored_degrees" when copying and pickling · f05c11df
  Tiago Peixoto authored Aug 14, 2015
  
  f05c11df
01 Aug, 2015 1 commit
- (overlap_)blockmodel.py: Convert clabel to "int" type · d3411dcf
  Tiago Peixoto authored Aug 01, 2015
  
  d3411dcf
27 Jul, 2015 1 commit
- Add eweight and vweight parameters to Nested/Covariate/Overlap/BlockState.copy() · fdd6f387
  Tiago Peixoto authored Jul 27, 2015
  
  fdd6f387
23 Jul, 2015 1 commit
- Add "g" parameter to Nested/Overlap/CovariateBlockState.copy() · d6716457
  Tiago Peixoto authored Jul 23, 2015
  
  d6716457
22 Jul, 2015 1 commit
- Fix bug in BlockState.entropy() when deg_corr=True and edge weights are being used · 36514eb1
  Tiago Peixoto authored Jul 22, 2015
```
This also adds the 'ignore_degrees' parameter.
```
  36514eb1
19 Jul, 2015 3 commits
- Fix issues with filtered graphs in blockmodel.py · 8d512bb3
  Tiago Peixoto authored Jul 20, 2015
  
  8d512bb3
- Replace float("inf") by numpy.inf · 6db830a9
  Tiago Peixoto authored Jul 19, 2015
  
  6db830a9
- Fix possible infinite loop in minimize_blockmodel_dl() · 19ccc559
  Tiago Peixoto authored Jul 19, 2015
  
  19ccc559
08 Jul, 2015 1 commit
- Fix typo in mcmc_sweep() · 9774522c
  Tiago Peixoto authored Jul 08, 2015
  
  9774522c
05 Jul, 2015 1 commit
- Add support for "target_blocks" in mcmc_sweep() · 44a65959
  Tiago Peixoto authored Jul 06, 2015
  
  44a65959
01 Jul, 2015 2 commits
- Fix problem with initial bracketing in minimize_blockmodel_dl() · 4eca7b1e
  Tiago Peixoto authored Jul 02, 2015
  
  4eca7b1e
- Fix unweighted_merge semantics in mcmc_sweep() · 5dfd641b
  Tiago Peixoto authored Jul 02, 2015
  
  5dfd641b
05 Jun, 2015 1 commit
- Fix memory usage issue in graph_blockmodel.cc · 92d0c0b5
  Tiago Peixoto authored Jun 05, 2015
  
  92d0c0b5
01 May, 2015 1 commit
- Fix numerical issue in OverlapBlockState.entropy() with excessive overlaps · 0e7a05fb
  Tiago Peixoto authored May 01, 2015
  
  0e7a05fb
23 Apr, 2015 1 commit
- Enable (and clear) more strict warnings during compilation · c72bb4c0
  Tiago Peixoto authored Apr 23, 2015
  
  c72bb4c0
21 Apr, 2015 1 commit
- Fix bug in covariate_blockmodel.py with the overlapping case · 0fe23164
  Tiago Peixoto authored Apr 21, 2015
  
  0fe23164
16 Apr, 2015 1 commit
- Fix small docstring typo. · 4b3e3a57
  Tiago Peixoto authored Apr 17, 2015
  
  4b3e3a57
11 Apr, 2015 1 commit
- Small docstring fixes · b8446f7b
  Tiago Peixoto authored Apr 11, 2015
  
  b8446f7b
10 Apr, 2015 2 commits
- Implement SBM inference with layers and edge covariates · a5574175
  Tiago Peixoto authored Sep 29, 2014
  
  a5574175
- Replace average by sum in condensation_graph() · 8e851554
  Tiago Peixoto authored Oct 08, 2014
  
  8e851554
08 Jan, 2015 1 commit
- Update copyright information · adf14b20
  Tiago Peixoto authored Jan 08, 2015
  
  adf14b20
29 Sep, 2014 1 commit
- Fix destructor bug in BlockState · 53af7627
  Tiago Peixoto authored Sep 29, 2014
  
  53af7627
18 Sep, 2014 1 commit
- Fix BlockState destructor · 5229271f
  Tiago Peixoto authored Sep 17, 2014
  
  5229271f
16 Sep, 2014 2 commits
- Fix inconsistency issue with minimize_nested_blockmodel_dl() when clabel is used with overlap=True · 26150b75
  Tiago Peixoto authored Sep 12, 2014
  
  26150b75
- Keep track of (Overlap)BlockState instances to free cache resources when possible · 38e2952a
  Tiago Peixoto authored Sep 13, 2014
  
  38e2952a
11 Sep, 2014 1 commit
- Update references in blockmodel code · 412aa6f0
  Tiago Peixoto authored Sep 11, 2014
  
  412aa6f0
09 Sep, 2014 1 commit
- Refactor SBM code and implement overlapping model · ab6bef60
  Tiago Peixoto authored Feb 21, 2014
  
  ab6bef60
25 Mar, 2014 1 commit
- Documentation updates · 4546c908
  Tiago Peixoto authored Mar 25, 2014
  
  4546c908
14 Mar, 2014 1 commit
- Only initialize non-filtered properties in BlockState.__init_() · 7573f57e
  Tiago Peixoto authored Feb 17, 2014
  
  7573f57e
07 Feb, 2014 1 commit
- Fix compatibility bug with Python 3.2 · a6ccdb26
  Tiago Peixoto authored Feb 07, 2014
  
  a6ccdb26
04 Feb, 2014 1 commit
- Update citation information in docstrings · 28de6290
  Tiago Peixoto authored Feb 04, 2014
  
  28de6290
03 Feb, 2014 2 commits
- Remove redundant get_weight() method in BlockState and update get_ers() docstring · 5d66e191
  Tiago Peixoto authored Feb 03, 2014
  
  5d66e191
- Change default value for parameter 'c' in multilevel_minimize() · ed54390f
  Tiago Peixoto authored Feb 02, 2014
  
  ed54390f
23 Jan, 2014 1 commit
- Ignore self-loops when merging nodes in block graph · 2e1d1a07
  Tiago Peixoto authored Jan 22, 2014
  
  2e1d1a07
22 Jan, 2014 1 commit
- Remove redundant random_move parameter from mcmc_sweep() and related functions · 28610ba6
  Tiago Peixoto authored Jan 15, 2014
```
To specify fully random moves, one should set the parameter "c" to
"float(inf)", as explained in the docstring.
```
  28610ba6