- 03 Sep, 2009 5 commits
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Tiago Peixoto authored
Random salt should be protected with "omp critical", and edge sampler should check for the case when all edges have zero probability, and sample uniformly.
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Tiago Peixoto authored
Load 'topology' instead of 'misc'.
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Tiago Peixoto authored
This implements a layout module (called 'draw' from python) with an implementation of the arf spring-block layout.
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Tiago Peixoto authored
These functions group several scalar properties into one vector properties, and ungroup a vector property into several scalar properties.
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Tiago Peixoto authored
It is not necessary to gather the data range if the bin size is constant. This also changes the histogram code, to better handle the constant-size bin situation.
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- 01 Sep, 2009 1 commit
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Tiago Peixoto authored
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- 27 Aug, 2009 1 commit
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Tiago Peixoto authored
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- 22 Aug, 2009 2 commits
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Tiago Peixoto authored
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Tiago Peixoto authored
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- 21 Aug, 2009 7 commits
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Tiago Peixoto authored
This is a large commit which replaces lambda::bind with boost::bind in most parts of the code. This improves compilation time, and slightly decreases compilation memory usage in some cases.
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Tiago Peixoto authored
This includes the edmonds karp, push relabel and kolmogorov maximum flow algorithms from the BGL.
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Tiago Peixoto authored
Use correct types and always pass GraphWrap objects by value.
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Tiago Peixoto authored
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Tiago Peixoto authored
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Tiago Peixoto authored
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Tiago Peixoto authored
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- 17 Aug, 2009 3 commits
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Tiago Peixoto authored
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Tiago Peixoto authored
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Tiago Peixoto authored
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- 16 Aug, 2009 6 commits
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Tiago Peixoto authored
This also includes convenience property map checks.
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Tiago Peixoto authored
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Tiago Peixoto authored
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Tiago Peixoto authored
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Tiago Peixoto authored
load() function no longer supported in scipy.
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Tiago Peixoto authored
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- 13 Aug, 2009 2 commits
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Tiago Peixoto authored
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Tiago Peixoto authored
No longer only thrown GraphError upon any error, but instead throw specific exceptions which are more meaninful and are mapped to standard python exceptions, such as IOError, ValueError and RuntimeError.
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- 09 Aug, 2009 1 commit
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Tiago Peixoto authored
Path sampling is done using different bias, and the edge sampling is now done correctly. There is now only one parameter 'n_iter' which replaces 'min/max_iter' and 'epslon'.
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- 07 Aug, 2009 4 commits
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Tiago Peixoto authored
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Tiago Peixoto authored
When using undirected graphs, the implicit direction of each edge was not properly handled, and the correlated case would not work. Now, in this case, the direction is always checked, and the edge is inverted if necessary.
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Tiago Peixoto authored
This would cause the graph to become directed (when previously undirected) in some circumstances.
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Tiago Peixoto authored
This is a workaround for a behaviour of graphviz which is not well understood.
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- 04 Aug, 2009 4 commits
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Tiago Peixoto authored
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Tiago Peixoto authored
The RNG object must be passed by _reference_ not by value, as is the default! Otherwise the RNG state does not change...
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Tiago Peixoto authored
Target degrees were not being sampled correctly from their probability.
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Tiago Peixoto authored
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- 03 Aug, 2009 2 commits
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Tiago Peixoto authored
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Tiago Peixoto authored
Reference counts of newly created arrays must always be incremented, and not borrowed().
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- 02 Aug, 2009 2 commits
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Tiago Peixoto authored
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Tiago Peixoto authored
This prints useful library information.
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