1. 24 Aug, 2011 1 commit
    • Tiago Peixoto's avatar
      Several improvements to random_rewire() / random_graph() · 8240714e
      Tiago Peixoto authored
      This introduces several simplifications and corrections to the graph
      rewire algorithm, to guarantee unbiased sampling.
      
      Now a move is outright rejected if it produces a
      self-loop/parallel-edge, instead of retried. This also adds a
      "non-sweep" mode, where edges are rewired randomly, possibly with
      repetition.
      
      The edge moves are now simplified to the target of the edges only,
      since swaping sources is redundant.
      
      The number of iterations can now be explicitly modified, so it is not
      necessary to call the function more than once, and it is emphasized in
      the documentation that only after sufficiently many iterations can the
      graph be guaranteed to be fully mixed.
      8240714e
  2. 14 Apr, 2011 1 commit
  3. 06 Mar, 2011 1 commit
  4. 02 Mar, 2011 1 commit
  5. 10 Feb, 2011 1 commit
  6. 13 Nov, 2010 1 commit
  7. 13 Jul, 2010 1 commit
    • Tiago Peixoto's avatar
      Change histogram binning semantics · 31791c81
      Tiago Peixoto authored
      Now the meaning of the bin edges given to the several histogram
      functions are the same as in numpy/scipy. This means that the last bin
      edge represents an upper bound on the last bin.
      31791c81
  8. 03 May, 2010 2 commits
  9. 07 Mar, 2010 1 commit
  10. 20 Feb, 2010 2 commits
  11. 05 Nov, 2009 1 commit
  12. 05 Oct, 2009 1 commit
  13. 01 Sep, 2009 1 commit
  14. 21 Aug, 2009 1 commit
  15. 17 Aug, 2009 1 commit
  16. 15 Jul, 2009 1 commit
  17. 25 Apr, 2009 1 commit
  18. 11 Jan, 2009 1 commit
  19. 26 Oct, 2008 1 commit
  20. 10 Sep, 2008 1 commit
  21. 21 Jul, 2008 1 commit
  22. 15 Jul, 2008 1 commit
  23. 17 Jun, 2008 1 commit
  24. 23 Apr, 2008 1 commit
  25. 10 Apr, 2008 1 commit
    • Tiago Peixoto's avatar
      Correlations algorithms refactoring · 360a3395
      Tiago Peixoto authored
      The whole histogram code has been redone, and the code has been
      simplified. The three-point vertex-edge-vertex correlation has been
      scrapped, since it's not frequently used, and would make compilation
      even more expensive.
      
      This also adds some missing files to the generation routine.
      360a3395