Commits · 60ee75ec96cc76f817bb8026fb5094a27fa595cc · Tiago Peixoto / graph-tool · GitLab

22 Mar, 2020 13 commits
- LatentMultigraphBlockState: fix self-loop marginal collection · 60ee75ec
  Tiago Peixoto authored Mar 22, 2020
  
  60ee75ec
- Makefile.am: add missing file · 71357981
  Tiago Peixoto authored Mar 22, 2020
  
  71357981
- Improve MCMC tests · bd167765
  Tiago Peixoto authored Mar 08, 2020
  
  bd167765
- multiflip_mcmc(): fix detailed balance · ac607229
  Tiago Peixoto authored Mar 08, 2020
  
  ac607229
- gibbs_sweep(): fix detailed balance · 2da36167
  Tiago Peixoto authored Mar 08, 2020
  
  2da36167
- blockmodel: change paramter 'max_BE' to a more explicit 'dense_bg' · 70f6e1bd
  Tiago Peixoto authored Mar 01, 2020
  
  70f6e1bd
- multiflip: remove O(N^2) corner case with coalescence · 5a041681
  Tiago Peixoto authored Feb 29, 2020
  
  5a041681
- inference: keep track of entropy range in mcmc_equilibrate() when force_niter is not None · 5062d1e7
  Tiago Peixoto authored Feb 21, 2020
  
  5062d1e7
- inference: implement coealescence split stage in multiflip_mcmc_sweep() · 08dfc58c
  Tiago Peixoto authored Feb 20, 2020
  
  08dfc58c
- Fix Graph.__repr__ with property maps · 4eee3d0d
  Tiago Peixoto authored Feb 05, 2020
  
  4eee3d0d
- Fix includes in Makefile.am · fcd6f2b8
  Tiago Peixoto authored Feb 05, 2020
  
  fcd6f2b8
- Paritition mode: implement nested partitions · 49ea6aa0
  Tiago Peixoto authored Jan 28, 2020
  
  49ea6aa0
- Initial implementation of partition modes · 918ae899
  Tiago Peixoto authored Jan 23, 2020
  
  918ae899
02 Mar, 2020 27 commits
- Implement bipartite maximum weighted matching · 2d134e6d
  Tiago Peixoto authored Feb 05, 2020
  
  2d134e6d
- Add support for maximum weight matching · cc5d0046
  Tiago Peixoto authored Jan 14, 2020
```
This also adds more consistency with the heuristic version of the code.
```
  cc5d0046
- Implement UncertainBaseState.collect_marginal_multigraph() and marginal_multigraph_entropy() · ad33169d
  Tiago Peixoto authored Jan 23, 2020
  
  ad33169d
- Fix bug in LayeredBlockState.get_edges_prob() · ca3ba6bc
  Tiago Peixoto authored Jan 23, 2020
  
  ca3ba6bc
- Fix bug in PropertyDict.items() · abfc17cf
  Tiago Peixoto authored Jan 23, 2020
  
  abfc17cf
- Improve numpy binding to boost::multi_array · ebe35be5
  Tiago Peixoto authored Jan 23, 2020
  
  ebe35be5
- graph_adjacency.hh: force inlining of edge iterator dereferencing · 6a5b5703
  Tiago Peixoto authored Jan 07, 2020
  
  6a5b5703
- inference: NestedBlockState constructor defaults to sampling=True · 2a175140
  Tiago Peixoto authored Jan 07, 2020
  
  2a175140
- inference: speedup addition of new groups · 8d546347
  Tiago Peixoto authored Jan 07, 2020
  
  8d546347
- Improve test_inference_mcmc.py · 85d8c6c9
  Tiago Peixoto authored Jan 07, 2020
  
  85d8c6c9
- Implement VICenterState · 48b231bd
  Tiago Peixoto authored Jan 07, 2020
  
  48b231bd
- inference: optimize multiflip_mcmc() by disabling uncessary edge list updates · 550ab951
  Tiago Peixoto authored Jan 07, 2020
  
  550ab951
- Switch to C++ syntax for function attributes · bf0e2475
  Tiago Peixoto authored Jan 07, 2020
  
  bf0e2475
- inference: fix split-merge bias in multiflip MCMC · 161d5214
  Tiago Peixoto authored Jan 02, 2020
  
  161d5214
- inference: modify LatentMultigraphBlockState.collect_marginal() to gather multiedges · 1cc4bfb1
  Tiago Peixoto authored Jan 01, 2020
  
  1cc4bfb1
- inference: Add LatentMultigraphBlockState as a wrapper to UncertainBlockState · daf7502b
  Tiago Peixoto authored Jan 01, 2020
  
  daf7502b
- inference: fix clabel enforcement in mcmc/multiflip_mcmc · 4822ba5b
  Tiago Peixoto authored Dec 29, 2019
  
  4822ba5b
- inference: fix mergesplit with clabel in multflip_mcmc_sweep() · 3ca7df5f
  Tiago Peixoto authored Dec 27, 2019
  
  3ca7df5f
- inference: add scatter stage split to multiflip_mcmc · de8556fc
  Tiago Peixoto authored Dec 14, 2019
  
  de8556fc
- inference: preserve pclabel in mcmc · 8918329f
  Tiago Peixoto authored Dec 14, 2019
  
  8918329f
- PropertyMap: fix pickle backwards compatibility · 1d780746
  Tiago Peixoto authored Dec 13, 2019
  
  1d780746
- Fix typo in inference HOWTO · 91954a2d
  Tiago Peixoto authored Dec 11, 2019
  
  91954a2d
- inference: prevent clabel invalidation in multiflip_mcmc_sweep() · 72cb613d
  Tiago Peixoto authored Dec 11, 2019
  
  72cb613d
- inference: add random imbalance to split staging in multiflip_mcmc_sweep() · 6bffcc02
  Tiago Peixoto authored Dec 10, 2019
  
  6bffcc02
- hierarchy_minimize(): Fix NameError when the caller supplies a hierarchy that... · 8062aa44
  Stuart Berg authored Jan 30, 2020 and Tiago Peixoto committed Mar 02, 2020
```
hierarchy_minimize(): Fix NameError when the caller supplies a hierarchy that is missing the top level
```
  8062aa44
- Fix autoconf detection of CGAL 5 · 95c0d9f0
  Tiago Peixoto authored Mar 02, 2020
```
This fixes issue #625
```
  95c0d9f0
- Add missing 'raise' in group_vector_property() · 57793779
  Tiago Peixoto authored Mar 02, 2020
```
This fixes issue #633
```
  57793779