Commits · 5d891f86fd721ea1347f5afdc42e020ca90dc4f6 · Tiago Peixoto / graph-tool

26 Oct, 2016 12 commits
- dynamic_sampler.hh: Keep track of removed items · 5d891f86
  Tiago Peixoto authored Oct 26, 2016
  
  5d891f86
- Add missing data_ptr() method to edge property maps · 9c58d676
  Tiago Peixoto authored Oct 21, 2016
  
  9c58d676
- Add perfect forwarding to 'beop' and 'efilt' arguments · 52b79792
  Tiago Peixoto authored Sep 19, 2016
  
  52b79792
- spence.cc: Include source documentation · a83d1c77
  Tiago Peixoto authored Oct 26, 2016
  
  a83d1c77
- graph_blockmodel_util.hh: Improve checking · cf79d6b5
  Tiago Peixoto authored Oct 26, 2016
  
  cf79d6b5
- blockmodel: Add node and edge count checks · 859bf4aa
  Tiago Peixoto authored Oct 26, 2016
  
  859bf4aa
- graph_blockmodel.hh: Fix gstate references · 407e0bff
  Tiago Peixoto authored Oct 26, 2016
  
  407e0bff
- graph_blockmodel.hh: More checking · e6183bba
  Tiago Peixoto authored Oct 26, 2016
  
  e6183bba
- blockmodel: Refactor egroup sampling · 9d395afb
  Tiago Peixoto authored Oct 26, 2016
  
  9d395afb
- graph_blockmodel.hh: Add beop parameter · f7f516e3
  Tiago Peixoto authored Oct 26, 2016
  
  f7f516e3
- blockmodel: Improve weighted degrees · 81d28712
  Tiago Peixoto authored Oct 26, 2016
  
  81d28712
- blockmodel: Refactor mcmc loop · 68abf8f3
  Tiago Peixoto authored Oct 26, 2016
  
  68abf8f3
20 Oct, 2016 3 commits
- inference.rst: Remove unnecessary test setups · 667a4926
  Tiago Peixoto authored Oct 20, 2016
  
  667a4926
- inference.blockmodel: Fix issue with ignore_degrees · 195526cf
  Tiago Peixoto authored Oct 20, 2016
  
  195526cf
- Replace '== None' by 'is None' · 6ad35ea3
  Tiago Peixoto authored Oct 20, 2016
  
  6ad35ea3
19 Oct, 2016 6 commits
- inference: Fix issue when computing description length using pclabel · 1966c234
  Tiago Peixoto authored Oct 19, 2016
  
  1966c234
- inference: Fix issues with rec_type="delta_t" · 39f0cf57
  Tiago Peixoto authored Oct 19, 2016
  
  39f0cf57
- inference: Remove unnecessary auxiliary functions · bfd485ee
  Tiago Peixoto authored Oct 19, 2016
  
  bfd485ee
- clustering.local_clustering(): Fix bug with directed graphs · 4a5bc229
  Tiago Peixoto authored Oct 19, 2016
  
  4a5bc229
- topology.similarity(): Add support for edge weights · c8d01f45
  Tiago Peixoto authored Oct 19, 2016
  
  c8d01f45
- inference.blockmodel: Avoid clabel overflow · 9668242a
  Tiago Peixoto authored Oct 19, 2016
```
This fixes issue #344
```
  9668242a
18 Oct, 2016 2 commits
- Fix issue with GraphView composition · aa26ba20
  Tiago Peixoto authored Oct 14, 2016
  
  aa26ba20
- inference.blockmodel: Improve microstate entropy · 48e68784
  Tiago Peixoto authored Oct 14, 2016
```
This adds an option to store a single partitions instead of all its
possible permutations.
```
  48e68784
14 Oct, 2016 2 commits
- Fix problem with and improve BlockState.get_edges_prob() · 7477469e
  Tiago Peixoto authored Oct 13, 2016
  
  7477469e
- Improve Graph.copy_property() · 666ccd25
  Tiago Peixoto authored Oct 13, 2016
```
The method no longer temporarily alters the vertex or edge filters.
```
  666ccd25
13 Oct, 2016 1 commit
- Fix problem with Graph.clear_vertex() when using filtered graphs · e833a522
  Tiago Peixoto authored Oct 13, 2016
  
  e833a522
10 Oct, 2016 1 commit

Temporarily disable extensive inference testing · 34172d3e

Tiago Peixoto authored Oct 10, 2016

It slows downs considerably the automated testing after each
commit. From now one this should be run at checkpoints before each
release.

34172d3e

25 Sep, 2016 1 commit
- inference: add support for discrete edge weights · c91eb270
  Tiago Peixoto authored Sep 25, 2016
  
  c91eb270
22 Sep, 2016 6 commits
- random_graph(): improve error message for invalid degrees · 81bcf5c4
  Tiago Peixoto authored Sep 22, 2016
  
  81bcf5c4
- Fix docstring typo in Graph.set_filters() · b5545018
  Tiago Peixoto authored Sep 21, 2016
  
  b5545018
- NestedBlockState: add nested_partition term · 4e5558a0
  Tiago Peixoto authored Sep 19, 2016
  
  4e5558a0
- Fix compilation problem with newer CGAL · 2a4aa1fb
  Tiago Peixoto authored Sep 21, 2016
  
  2a4aa1fb
- minimize.py: fix docstring · 14a128d1
  Tiago Peixoto authored Sep 19, 2016
  
  14a128d1
- bethe_entropy(): fix overflow problem · ec1a72fa
  Tiago Peixoto authored Sep 10, 2016
  
  ec1a72fa
10 Sep, 2016 1 commit
- inference: modularize neighbour sampling code · da0ea999
  Tiago Peixoto authored Sep 06, 2016
  
  da0ea999
05 Sep, 2016 2 commits
- shortest_distance(): clarify distance of unconnected vertices in documentation · e2e46593
  Tiago Peixoto authored Sep 05, 2016
  
  e2e46593
- kcore_decomposition(): fix inconsistency for directed graphs · 4cdad2f3
  Tiago Peixoto authored Sep 05, 2016
  
  4cdad2f3
14 Aug, 2016 1 commit
- blockmodel: fix bug with vertex movements · 1d2b1fab
  Tiago Peixoto authored Aug 14, 2016
  
  1d2b1fab
09 Aug, 2016 2 commits
- blockmodel: fix nested sampling of filtered graphs · c9a7fd1d
  Tiago Peixoto authored Aug 09, 2016
```
This fixes issue #322
```
  c9a7fd1d
- inference.blockmodel: simplify and speedup vertex movements · 62055e30
  Tiago Peixoto authored Aug 08, 2016
  
  62055e30