Commits · 3dd3d3d0eeceaacde3245b3330feec6f3fe73a84 · Tiago Peixoto / graph-tool

11 Apr, 2007 1 commit

Tiago Peixoto authored Apr 11, 2007


git-svn-id: https://svn.forked.de/graph-tool/trunk@77 d4600afd-f417-0410-95de-beed9576f240

3dd3d3d0

30 Jan, 2007 2 commits

* src/graph/graph.cc: fix reset filter when it's not enabled · c7fe00fd

Tiago Peixoto authored Jan 30, 2007

* src/graph-tool allow for parameter setting before loading property editing script


git-svn-id: https://svn.forked.de/graph-tool/trunk@74 d4600afd-f417-0410-95de-beed9576f240

c7fe00fd

fix option parsing · a5935300

Tiago Peixoto authored Jan 30, 2007


git-svn-id: https://svn.forked.de/graph-tool/trunk@73 d4600afd-f417-0410-95de-beed9576f240

a5935300

29 Jan, 2007 1 commit

* make range and python filtering independently optional · 51632e6c

Tiago Peixoto authored Jan 29, 2007

* accept external files for property editing routines
* include in_PROP() andd out_PROP() functions to be used in python filtering/property editing routines.


git-svn-id: https://svn.forked.de/graph-tool/trunk@71 d4600afd-f417-0410-95de-beed9576f240

51632e6c

25 Jan, 2007 1 commit
- add support for bash-completion through optcomplete (http://furius.ca/optcomplete) · a9e10b6b
  Tiago Peixoto authored Jan 25, 2007
```
git-svn-id: https://svn.forked.de/graph-tool/trunk@65 d4600afd-f417-0410-95de-beed9576f240
```
  a9e10b6b
12 Jan, 2007 1 commit
- add support for weights in degree correlations · aca4479d
  Tiago Peixoto authored Jan 12, 2007
```
git-svn-id: https://svn.forked.de/graph-tool/trunk@63 d4600afd-f417-0410-95de-beed9576f240
```
  aca4479d
20 Nov, 2006 1 commit

fix prefix handling in for/history option · 5320d59f

Tiago Peixoto authored Nov 20, 2006


git-svn-id: https://svn.forked.de/graph-tool/trunk@61 d4600afd-f417-0410-95de-beed9576f240

5320d59f

19 Nov, 2006 1 commit

changed sampled distance semantics · 7e06567e

Tiago Peixoto authored Nov 19, 2006


git-svn-id: https://svn.forked.de/graph-tool/trunk@60 d4600afd-f417-0410-95de-beed9576f240

7e06567e

14 Nov, 2006 1 commit
- converted tabs to spaces (emacs, why have you forsaken me?) · 6b764b67
  Tiago Peixoto authored Nov 14, 2006
```
git-svn-id: https://svn.forked.de/graph-tool/trunk@58 d4600afd-f417-0410-95de-beed9576f240
```
  6b764b67
13 Nov, 2006 1 commit

Added LabelParallelEdges() · dbb7bb2c

Tiago Peixoto authored Nov 13, 2006


git-svn-id: https://svn.forked.de/graph-tool/trunk@57 d4600afd-f417-0410-95de-beed9576f240

dbb7bb2c

12 Nov, 2006 1 commit

* Added community network generation · 05414a53

Tiago Peixoto authored Nov 12, 2006

* Added line graph generation
* src/graph-tool: some code de-uglification
* src/graph-tool: terminal output format changes


git-svn-id: https://svn.forked.de/graph-tool/trunk@56 d4600afd-f417-0410-95de-beed9576f240

05414a53

01 Nov, 2006 1 commit

* graph_community.cc: · 3243afae

Tiago Peixoto authored Nov 01, 2006

   - added support for saving annealing history to file
   - added support for continuing from an existing community partition


git-svn-id: https://svn.forked.de/graph-tool/trunk@54 d4600afd-f417-0410-95de-beed9576f240

3243afae

31 Oct, 2006 1 commit

* ComponentSizeHistogram() becomes LabelComponents() · fd7e85eb

Tiago Peixoto authored Oct 31, 2006

* fixed saving of undirected filtered graphs in graph_io.cc
* fixed correlated community detection in graph_community.cc


git-svn-id: https://svn.forked.de/graph-tool/trunk@53 d4600afd-f417-0410-95de-beed9576f240

fd7e85eb

14 Oct, 2006 1 commit

* src/graph/graph_community.cc: Extensively re-written. Now it's a bit slower,... · adb1700e

Tiago Peixoto authored Oct 14, 2006

* src/graph/graph_community.cc: Extensively re-written. Now it's a bit slower, but hopefully correct.


git-svn-id: https://svn.forked.de/graph-tool/trunk@52 d4600afd-f417-0410-95de-beed9576f240

adb1700e

09 Oct, 2006 1 commit
- * corrected and improved graph community code, thereby fixing ticket:6 · 19068a5f
  Tiago Peixoto authored Oct 09, 2006
```
git-svn-id: https://svn.forked.de/graph-tool/trunk@50 d4600afd-f417-0410-95de-beed9576f240
```
  19068a5f
05 Oct, 2006 1 commit

* fix bug with mersenne twister rng seeding on amd64 · c27d124c

Tiago Peixoto authored Oct 05, 2006

* fix command line help


git-svn-id: https://svn.forked.de/graph-tool/trunk@49 d4600afd-f417-0410-95de-beed9576f240

c27d124c

24 Sep, 2006 1 commit

* correct graphml headers · 999db6d6

Tiago Peixoto authored Sep 24, 2006

* fix ticket [9]
* fix --for bug with multiple options with different parameters
* Add initial support for community detection (ticket [6])


git-svn-id: https://svn.forked.de/graph-tool/trunk@47 d4600afd-f417-0410-95de-beed9576f240

999db6d6

04 Sep, 2006 1 commit

* Added minimum spanning tree support · c759f2f3

Tiago Peixoto authored Sep 04, 2006

* Range filters now support all kinds of scalar properties without falling back to python code


git-svn-id: https://svn.forked.de/graph-tool/trunk@46 d4600afd-f417-0410-95de-beed9576f240

c759f2f3

03 Sep, 2006 3 commits

* added support for reciprocity · 3266b079

Tiago Peixoto authored Sep 03, 2006

* python_filtering: added n_parallel() function


git-svn-id: https://svn.forked.de/graph-tool/trunk@45 d4600afd-f417-0410-95de-beed9576f240

3266b079

changed extended clustering start index from 0 to 1 · feb7071b
Tiago Peixoto authored Sep 03, 2006
```
git-svn-id: https://svn.forked.de/graph-tool/trunk@44 d4600afd-f417-0410-95de-beed9576f240
```
feb7071b
introduce a "for" option, which is just like "history" but files are always overwritten. · 05fa231a
Tiago Peixoto authored Sep 03, 2006
```
git-svn-id: https://svn.forked.de/graph-tool/trunk@43 d4600afd-f417-0410-95de-beed9576f240
```
05fa231a

23 Aug, 2006 1 commit

* src/graph/graph.cc: fixed range filter fallback · 2a9b92a7

Tiago Peixoto authored Aug 23, 2006

* src/graph/graph_python_filtering.hh: changed is_loop to is_self
* src/graph-tool: fixed memory leak related to exec statements and filtering


git-svn-id: https://svn.forked.de/graph-tool/trunk@42 d4600afd-f417-0410-95de-beed9576f240

2a9b92a7

17 Aug, 2006 1 commit

* add EditVertexProperty() and EditEdgeProperty() · 224bd568

Tiago Peixoto authored Aug 17, 2006

* cleanup src/graph/graph_python_filtering.hh


git-svn-id: https://svn.forked.de/graph-tool/trunk@39 d4600afd-f417-0410-95de-beed9576f240

224bd568

16 Aug, 2006 1 commit

* add GetDistanceHistogram, instead of GetAverageDistance · 1152b5ed

Tiago Peixoto authored Aug 16, 2006

* add GetSampledDistanceHistogram (in src/graph/graph_distance_sampled.cc)
* fix BFS initialization bug in src/graph/graph_extended_clustering.cc


git-svn-id: https://svn.forked.de/graph-tool/trunk@38 d4600afd-f417-0410-95de-beed9576f240

1152b5ed

15 Aug, 2006 1 commit

* added extended clustering code · 8f495045

Tiago Peixoto authored Aug 15, 2006

* separated graphml code into graphml.hpp and graphml.cpp, and added support for default property values
* added HashedDescriptorMap with automatic memory management



git-svn-id: https://svn.forked.de/graph-tool/trunk@36 d4600afd-f417-0410-95de-beed9576f240

8f495045

13 Aug, 2006 1 commit

* new python filtering code with different syntax. Now faster... · c8506c63

Tiago Peixoto authored Aug 13, 2006

* definition of HashedDescriptorMap


git-svn-id: https://svn.forked.de/graph-tool/trunk@34 d4600afd-f417-0410-95de-beed9576f240

c8506c63

11 Aug, 2006 1 commit

* changed python filtering semantics: edges are filtered before vertices, not... · 0ef1419f

Tiago Peixoto authored Aug 11, 2006

* changed python filtering semantics: edges are filtered before vertices, not simultaneously. Original (unfiltered) vertices degrees are available to the vertex filter prefixed with "orig_".
* added missing boost licence file to src/boost-workaround/LICENSE_1_0.txt
* updated FSF address in src/graph-tool


git-svn-id: https://svn.forked.de/graph-tool/trunk@33 d4600afd-f417-0410-95de-beed9576f240

0ef1419f

10 Aug, 2006 1 commit
- if not running inside a terminal, it's not possible to get the terminal geometry · 53f38d38
  Tiago Peixoto authored Aug 10, 2006
```
git-svn-id: https://svn.forked.de/graph-tool/trunk@31 d4600afd-f417-0410-95de-beed9576f240
```
  53f38d38
09 Aug, 2006 1 commit

* added GetAverageCombinedVertexCorrelation() · 3445d826

Tiago Peixoto authored Aug 09, 2006

* put combined degree correlation stuff in src/graph/graph_correlations_combined.cc
* some code cleanups in src/graph-tool


git-svn-id: https://svn.forked.de/graph-tool/trunk@29 d4600afd-f417-0410-95de-beed9576f240

3445d826

03 Aug, 2006 1 commit

* generalized GetCombinedDegreeHistogram() into GetCombinedVertexHistogram() · aaaa4bb7

Tiago Peixoto authored Aug 03, 2006

* removed GetVectorScalarCorrelation(), since it is substituted by the above
* changed range filter policy: if property is non-double, use generic python filtering instead


git-svn-id: https://svn.forked.de/graph-tool/trunk@18 d4600afd-f417-0410-95de-beed9576f240

aaaa4bb7

01 Aug, 2006 1 commit

* move distance stuff to src/graph/graph_distance.cc · 53c936d8

Tiago Peixoto authored Aug 01, 2006

* average distances now accept weights
* added DynamicPropertyMapWrap


git-svn-id: https://svn.forked.de/graph-tool/trunk@17 d4600afd-f417-0410-95de-beed9576f240

53c936d8

31 Jul, 2006 2 commits
- psyco and scipy should be optional · 9a7b7361
  Tiago Peixoto authored Jul 31, 2006
```
git-svn-id: https://svn.forked.de/graph-tool/trunk@16 d4600afd-f417-0410-95de-beed9576f240
```
  9a7b7361
- default to uncorrelated case also when doing rejection sampling · a4c0927a
  Tiago Peixoto authored Jul 31, 2006
```
git-svn-id: https://svn.forked.de/graph-tool/trunk@15 d4600afd-f417-0410-95de-beed9576f240
```
  a4c0927a
24 Jul, 2006 1 commit

* added possibility to load expression from file · 017675f0

Tiago Peixoto authored Jul 24, 2006

* fixed rounding error


git-svn-id: https://svn.forked.de/graph-tool/trunk@13 d4600afd-f417-0410-95de-beed9576f240

017675f0

22 Jul, 2006 1 commit

* fix assortativity coefficient · 6855de1e

Tiago Peixoto authored Jul 22, 2006

* add jackknife variance
* add scalar assortativity coefficient


git-svn-id: https://svn.forked.de/graph-tool/trunk@11 d4600afd-f417-0410-95de-beed9576f240

6855de1e

21 Jul, 2006 1 commit

* fix clustering and add jackknife variance · 479e4da0

Tiago Peixoto authored Jul 21, 2006

* fix history temp file handling buglet


git-svn-id: https://svn.forked.de/graph-tool/trunk@10 d4600afd-f417-0410-95de-beed9576f240

479e4da0

18 Jul, 2006 1 commit

* removed neighbour selectors (not really needed at all). Improves compilation... · 3412e2df

Tiago Peixoto authored Jul 18, 2006

* removed neighbour selectors (not really needed at all). Improves compilation speed, memory usage and binary size!
* removed clustering specific code in favour of more generic property code
* added GetEdgeHistogram()
* renamed some functions/options ("degree"->"vertex")


git-svn-id: https://svn.forked.de/graph-tool/trunk@9 d4600afd-f417-0410-95de-beed9576f240

3412e2df

13 Jul, 2006 1 commit

removing edge selectors, since the same behaviour can be obtained by using the... · 55cdce65

Tiago Peixoto authored Jul 13, 2006

removing edge selectors, since the same behaviour can be obtained by using the --undirected and --reverse filters, as long as the in-degree is also seen when the undirected filter is turned on


git-svn-id: https://svn.forked.de/graph-tool/trunk@7 d4600afd-f417-0410-95de-beed9576f240

55cdce65

11 Jul, 2006 1 commit
- correct (invert) edge/vertex filtering semantics · de3bae43
  Tiago Peixoto authored Jul 11, 2006
```
git-svn-id: https://svn.forked.de/graph-tool/trunk@6 d4600afd-f417-0410-95de-beed9576f240
```
  de3bae43
10 Jul, 2006 1 commit

Initial import · a9aff6b4

Tiago Peixoto authored Jul 10, 2006

git-svn-id: https://svn.forked.de/graph-tool/trunk@1 d4600afd-f417-0410-95de-beed9576f240

a9aff6b4