- 29 Apr, 2012 3 commits
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Tiago Peixoto authored
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Tiago Peixoto authored
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Tiago Peixoto authored
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- 15 Apr, 2012 2 commits
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Tiago Peixoto authored
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Tiago Peixoto authored
This fixes a bug where some matches were skipped, due to a spurious, abrupt termination of the search. This also changes the default argument to 'random=False'.
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- 04 Sep, 2011 1 commit
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Tiago Peixoto authored
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- 02 Sep, 2011 2 commits
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Tiago Peixoto authored
Images are now converted to png a posteriori for html output, but are used as pdf for latex.
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Tiago Peixoto authored
This fixes a bug in the "correlated" mode in random_rewire().
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- 26 Aug, 2011 1 commit
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Tiago Peixoto authored
This implements a general "blockmodel" generation / rewiring algorithm, using Gibbs acceptence / rejection sampling (a.k.a Metropolis-Hastings). This also implements some optimizations in the rewiring code, which makes it more efficient on filtered graphs.
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- 24 Aug, 2011 2 commits
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Tiago Peixoto authored
This introduces several simplifications and corrections to the graph rewire algorithm, to guarantee unbiased sampling. Now a move is outright rejected if it produces a self-loop/parallel-edge, instead of retried. This also adds a "non-sweep" mode, where edges are rewired randomly, possibly with repetition. The edge moves are now simplified to the target of the edges only, since swaping sources is redundant. The number of iterations can now be explicitly modified, so it is not necessary to call the function more than once, and it is emphasized in the documentation that only after sufficiently many iterations can the graph be guaranteed to be fully mixed.
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Tiago Peixoto authored
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- 21 Jun, 2011 1 commit
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Tiago Peixoto authored
This fixes a bug where filtered vertices would be incorrectly marked, if the largest component index happend to be zero.
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- 21 Apr, 2011 1 commit
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Tiago Peixoto authored
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- 15 Apr, 2011 1 commit
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Tiago Peixoto authored
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- 02 Mar, 2011 1 commit
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Tiago Peixoto authored
This fixes a leftover bug from the removal of the 'core' submodule.
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- 10 Feb, 2011 1 commit
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Tiago Peixoto authored
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- 29 Jan, 2011 1 commit
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Tiago Peixoto authored
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- 18 Jan, 2011 1 commit
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Tiago Peixoto authored
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- 16 Jan, 2011 1 commit
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Tiago Peixoto authored
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- 21 Dec, 2010 1 commit
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Tiago Peixoto authored
Added more DOI links to references, and other cosmetic changes.
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- 05 Dec, 2010 1 commit
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Tiago Peixoto authored
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- 13 Nov, 2010 1 commit
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Tiago Peixoto authored
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- 22 May, 2010 1 commit
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Tiago Peixoto authored
This allows for sampling of random subgraph isomorphisms.
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- 03 May, 2010 3 commits
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Tiago Peixoto authored
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Tiago Peixoto authored
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Tiago Peixoto authored
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- 07 Mar, 2010 2 commits
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Tiago Peixoto authored
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Tiago Peixoto authored
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- 20 Feb, 2010 2 commits
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Tiago Peixoto authored
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Tiago Peixoto authored
This fixes the expected values for several doctests, after random_graph() re-factoring.
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- 04 Feb, 2010 1 commit
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Tiago Peixoto authored
This implements a shortest_path() function which returns the shortest path between two vertices. This also modifies shortest_distances, such that a predecessor map is optionally returned.
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- 30 Jan, 2010 1 commit
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Tiago Peixoto authored
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- 28 Jan, 2010 1 commit
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Tiago Peixoto authored
Support for edge/vertex labelling is 99% done, but it is currently impractical to compile with GCC. If GCC 4.5 doesn't do a better job, then a workaround would be necessary.
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- 06 Dec, 2009 1 commit
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Tiago Peixoto authored
This is a wrapper around BGL's boyer_myrvold_planarity_test.
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- 04 Nov, 2009 1 commit
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Tiago Peixoto authored
This includes the shortest_distance() function in the topology module.
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- 05 Oct, 2009 1 commit
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Tiago Peixoto authored
This completes all the documentation up to this point.
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- 03 Oct, 2009 1 commit
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Tiago Peixoto authored
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- 03 Sep, 2009 1 commit
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Tiago Peixoto authored
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- 21 Aug, 2009 1 commit
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Tiago Peixoto authored
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- 17 Aug, 2009 1 commit
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Tiago Peixoto authored
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