Commits · 0c92adbd791921dba43c318324a58ea9d27c9013 · Tiago Peixoto / graph-tool · GitLab

12 Apr, 2016 1 commit
- Fix bug in GraphAdaptor's in_edges() · 0c92adbd
  Tiago Peixoto authored Apr 12, 2016
  
  0c92adbd
11 Apr, 2016 4 commits
- Improve iteration over out-/in-neighbours · 936e7260
  Tiago Peixoto authored Apr 11, 2016
  
  936e7260
- vertex_similarity(): Small fixes to docstring · 9e41e054
  Tiago Peixoto authored Apr 11, 2016
  
  9e41e054
- draw.random_layout(): Remove Numpy warning · cd8a85bb
  Tiago Peixoto authored Apr 11, 2016
  
  cd8a85bb
- Implement topology.vertex_similarity() · e173b204
  Tiago Peixoto authored Apr 11, 2016
```
This fixes issue #287
```
  e173b204
10 Apr, 2016 4 commits
- Fix MulticanonicalState.get_allowed_energies() · 058b172a
  Tiago Peixoto authored Apr 10, 2016
  
  058b172a
- multicanonical_equilibrate(): improve refinement · 53061723
  Tiago Peixoto authored Apr 10, 2016
  
  53061723
- multicanonical_equilibrate(): Use both extrema to guarantee histogram flatness · 040f4f48
  Tiago Peixoto authored Apr 10, 2016
  
  040f4f48
- Improve initialization speed of BlockState.{mcmc,gibbs,multicanonical}_sweep · 2a058f62
  Tiago Peixoto authored Apr 10, 2016
  
  2a058f62
09 Apr, 2016 3 commits
- MulticanonicalState: improve flatness criterium · c143f91d
  Tiago Peixoto authored Apr 09, 2016
  
  c143f91d
- blockmodel.py: docstring and test fixes · 6e6c375c
  Tiago Peixoto authored Apr 09, 2016
  
  6e6c375c
- multicanonical_loop.hh: check for out-of-bounds condition · 8455d1d4
  Tiago Peixoto authored Apr 09, 2016
  
  8455d1d4
08 Apr, 2016 3 commits
- Fix bug in BlockState.virtual_vertex_move() · 2f50ceaf
  Tiago Peixoto authored Apr 08, 2016
  
  2f50ceaf
- Fix MulticanonicalState.get_entropy() · e6361582
  Tiago Peixoto authored Apr 08, 2016
  
  e6361582
- inference: some improvements to the multicanonical code · 864c5f68
  Tiago Peixoto authored Apr 08, 2016
  
  864c5f68
07 Apr, 2016 3 commits
- Implement semi-Bayesian block model inference · 413c28a1
  Tiago Peixoto authored Apr 07, 2016
```
This includes code for expectation maximization with belief propagation
for the stochastic block model.
```
  413c28a1
- Better default layout for football network · 93b1d393
  Tiago Peixoto authored Apr 07, 2016
  
  93b1d393
- numpy_bind.hh: change exception name · 9aa21c5c
  Tiago Peixoto authored Apr 07, 2016
  
  9aa21c5c
06 Apr, 2016 2 commits
- Fix some documentation typos · 09100295
  Tiago Peixoto authored Apr 06, 2016
  
  09100295
- Bump version to 2.15dev · eb1eb083
  Tiago Peixoto authored Apr 06, 2016
  
  eb1eb083
05 Apr, 2016 4 commits
- Bump version to 2.14 · 3b5707ca
  Tiago Peixoto authored Apr 05, 2016
  
  3b5707ca
- src/graph/inference/Makefile.am: Add missing files · ec7c6e09
  Tiago Peixoto authored Apr 05, 2016
  
  ec7c6e09
- Fix some documentation typos. · 829c54e7
  Tiago Peixoto authored Apr 05, 2016
  
  829c54e7
- Fix bug in BlockState.add_vertex() · af502694
  Tiago Peixoto authored Apr 05, 2016
  
  af502694
04 Apr, 2016 7 commits
- Remove reference to <boost/graph/reverse_graph.hpp> · 88496100
  Tiago Peixoto authored Apr 05, 2016
  
  88496100
- Fix bug in BlockState.get_edges_prob() · 1d7bbba4
  Tiago Peixoto authored Apr 04, 2016
  
  1d7bbba4
- Implement hashing of edge descriptors · acfeb0ac
  Tiago Peixoto authored Apr 04, 2016
  
  acfeb0ac
- Fix boundary issue in NestedBlockState.replace_level() · 32a06013
  Tiago Peixoto authored Apr 04, 2016
  
  32a06013
- Fix issue with PropertyArray during pickling · 520254ce
  Tiago Peixoto authored Apr 04, 2016
  
  520254ce
- nested_blockmodel.py: Fix assertion error · b20a625e
  Tiago Peixoto authored Apr 04, 2016
  
  b20a625e
- blockmodel.py: Fix bug with ignore_degrees · 136db0e2
  Tiago Peixoto authored Apr 04, 2016
  
  136db0e2
03 Apr, 2016 9 commits
- Fix bug in graph_draw() with sparsehash enabled · d9bcc66f
  Tiago Peixoto authored Apr 04, 2016
```
This fixes issue #285
```
  d9bcc66f
- minimize_nested_blockmodel_dl(): Fix bug with b_max and overlapping state · d0fb50fc
  Tiago Peixoto authored Apr 04, 2016
  
  d0fb50fc
- Improved consistency checking · cb3e6d45
  Tiago Peixoto authored Apr 04, 2016
  
  cb3e6d45
- minimize(_nested)_blockmodel_dl(): Fix handling of clabel and pclabel · 5d2de77b
  Tiago Peixoto authored Apr 03, 2016
  
  5d2de77b
- Implement BlockState.get_edges_prob() · 78dcac84
  Tiago Peixoto authored Apr 03, 2016
  
  78dcac84
- mcmc_equilibrate(): add "block_moves" argument · c5e1c6a2
  Tiago Peixoto authored Apr 03, 2016
  
  c5e1c6a2
- Fix issue with mcmc_gibbs() for weighted block graphs · 1a33662e
  Tiago Peixoto authored Apr 03, 2016
  
  1a33662e
- Remove spurious assert() · f0bcd76e
  Tiago Peixoto authored Apr 03, 2016
  
  f0bcd76e
- Fix bug with perfect_prop_hash() · 6f0c58fe
  Tiago Peixoto authored Apr 03, 2016
  
  6f0c58fe