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graph-tool
Commit 8141f5f2 authored by Tiago Peixoto's avatar Tiago Peixoto
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Add support for nested lists in gml.hh

parent c6dc8cf7
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Showing with 111 additions and 66 deletions
src/graph/gml.hh
View file @ 8141f5f2
......@@ -64,6 +64,57 @@ private:
std::string _what;
};
struct to_dict_visitor: public boost::static_visitor<>
{
to_dict_visitor(const std::string& key, boost::python::dict& dict)
: key(key), dict(dict) {}
template <class Val>
void operator()(Val& val) const
{
const_cast<boost::python::dict&>(dict)[key] = val;
}
template <class Val>
void operator()(std::unordered_map<std::string, Val>& val) const
{
boost::python::dict n_dict;
for (auto& kv : val)
boost::apply_visitor(to_dict_visitor(kv.first, n_dict), kv.second);
const_cast<boost::python::dict&>(dict)[key] = n_dict;
}
const std::string& key;
const boost::python::dict& dict;
};
template <class Desc>
struct prop_val_visitor: public boost::static_visitor<>
{
prop_val_visitor(const std::string& name, dynamic_properties& dp, Desc v)
: name(name), dp(dp), v(v) {}
template <class Val>
void operator()(Val& val) const
{
put(name, const_cast<dynamic_properties&>(dp), v, val);
}
template <class Val>
void operator()(std::unordered_map<std::string, Val>& val) const
{
boost::python::dict dict;
for (auto& kv : val)
boost::apply_visitor(to_dict_visitor(kv.first, dict), kv.second);
put(name, const_cast<dynamic_properties&>(dp), v,
boost::python::object(dict));
}
const std::string& name;
const dynamic_properties& dp;
Desc v;
};
template <class Graph>
class gml_state
......@@ -76,7 +127,10 @@ public:
: _g(g), _dp(dp), _directed(false), _ignore_vp(ignore_vp),
_ignore_ep(ignore_ep), _ignore_gp(ignore_gp) {}
typedef boost::variant<std::string, int, double> val_t;
typedef boost::make_recursive_variant<std::string, int, double,
std::unordered_map<std::string,
boost::recursive_variant_>>
::type val_t;
// key / value mechanics
void push_key(const std::string& key)
......@@ -115,24 +169,18 @@ public:
throw gml_parse_error("invalid node id");
}
typename graph_traits<Graph>::vertex_descriptor v = get_vertex(id);
typedef typename graph_traits<Graph>::vertex_descriptor vertex_t;
vertex_t v = get_vertex(id);
// put properties
for (typeof(_stack.back().second.begin()) iter = _stack.back().second.begin();
iter != _stack.back().second.end(); ++iter)
for (auto& iter : _stack.back().second)
{
if (iter->first == "id")
if (iter.first == "id")
continue;
if (_ignore_vp.find(iter->first) != _ignore_vp.end())
if (_ignore_vp.find(iter.first) != _ignore_vp.end())
continue;
try
{
put(iter->first, _dp, v, boost::get<string>(iter->second));
}
catch (bad_get)
{
put(iter->first, _dp, v, boost::get<double>(iter->second));
}
boost::apply_visitor(prop_val_visitor<vertex_t>(iter.first, _dp, v),
iter.second);
}
}
else if (k == "edge")
......@@ -157,49 +205,43 @@ public:
s = get_vertex(source);
t = get_vertex(target);
typename graph_traits<Graph>::edge_descriptor e =
add_edge(s, t, _g).first;
typedef typename graph_traits<Graph>::edge_descriptor edge_t;
edge_t e = add_edge(s, t, _g).first;
// put properties
for (typeof(_stack.back().second.begin()) iter = _stack.back().second.begin();
iter != _stack.back().second.end(); ++iter)
for (auto& iter : _stack.back().second)
{
if (iter->first == "id" || iter->first == "source" || iter->first == "target")
if (iter.first == "id" || iter.first == "source" || iter.first == "target")
continue;
if (_ignore_ep.find(iter->first) != _ignore_ep.end())
if (_ignore_ep.find(iter.first) != _ignore_ep.end())
continue;
try
{
put(iter->first, _dp, e, boost::get<string>(iter->second));
}
catch (bad_get)
{
put(iter->first, _dp, e, boost::get<double>(iter->second));
}
boost::apply_visitor(prop_val_visitor<edge_t>(iter.first, _dp, e),
iter.second);
}
}
else if (k == "graph")
{
// put properties
for (typeof(_stack.back().second.begin()) iter = _stack.back().second.begin();
iter != _stack.back().second.end(); ++iter)
for (auto& iter : _stack.back().second)
{
if (iter->first == "directed")
_directed = boost::get<double>(iter->second);
if (_ignore_gp.find(iter->first) != _ignore_gp.end())
if (iter.first == "directed")
_directed = boost::get<double>(iter.second);
if (_ignore_gp.find(iter.first) != _ignore_gp.end())
continue;
try
{
put(iter->first, _dp, graph_property_tag(), boost::get<string>(iter->second));
}
catch (bad_get)
{
put(iter->first, _dp, graph_property_tag(), boost::get<double>(iter->second));
}
boost::apply_visitor(prop_val_visitor<graph_property_tag>(iter.first, _dp,
graph_property_tag()),
iter.second);
}
}
else
{
// Push nested lists down the stack
if (_stack.size() < 2)
throw gml_parse_error("invalid syntax: list '" + k + "' not within 'node', 'edge' or 'graph'");
_stack[_stack.size() - 2].second[k] = _stack.back().second;
}
_stack.pop_back();
}
......@@ -223,7 +265,7 @@ private:
bool _directed;
std::unordered_map<int, typename graph_traits<Graph>::vertex_descriptor> _vmap;
// the stack holds the keys, and its properties (but omits nested lists)
// the stack holds the keys, and its properties
typedef std::unordered_map<std::string, val_t> prop_list_t;
vector<pair<std::string, prop_list_t> > _stack;
......@@ -376,59 +418,52 @@ void write_gml(std::ostream& out, const Graph& g, VertexIndexMap vertex_index,
if (graph_is_directed)
out << " directed " << 1 << endl;
for (dynamic_properties::const_iterator i = dp.begin(); i != dp.end();
++i)
for (auto& i : dp)
{
if (i->second->key() == typeid(graph_property_tag))
if (i.second->key() == typeid(graph_property_tag))
{
std::string val = print_val<value_types>(*i->second,
std::string val = print_val<value_types>(*i.second,
graph_property_tag());
if (val.empty())
continue;
out << " " << i->first << " " << val << endl;
out << " " << i.first << " " << val << endl;
}
}
typedef typename graph_traits<Graph>::vertex_iterator vertex_iterator;
vertex_iterator v, v_end;
for (tie(v, v_end) = vertices(g); v != v_end; ++v)
for (auto v : vertices_range(g))
{
out << " node [" << endl;
out << " id " << get(vertex_index, *v) << endl;
out << " id " << get(vertex_index, v) << endl;
for (dynamic_properties::const_iterator i = dp.begin(); i != dp.end();
++i)
for (auto& i : dp)
{
if (i->second->key() == typeid(vertex_descriptor))
if (i.second->key() == typeid(vertex_descriptor))
{
std::string val = print_val<value_types>(*i->second, *v);
std::string val = print_val<value_types>(*i.second, v);
if (val.empty())
continue;
out << " " << i->first << " " << val << endl;
out << " " << i.first << " " << val << endl;
}
}
out << " ]" << endl;
}
typedef typename graph_traits<Graph>::edge_iterator edge_iterator;
edge_iterator e, e_end;
typename graph_traits<Graph>::edges_size_type edge_count = 0;
for (tie(e, e_end) = edges(g); e != e_end; ++e)
for (auto e : edges_range(g))
{
out << " edge [" << endl;
out << " id " << edge_count++ << endl;
out << " source " << get(vertex_index, source(*e, g)) << endl;
out << " target " << get(vertex_index, target(*e, g)) << endl;
out << " source " << get(vertex_index, source(e, g)) << endl;
out << " target " << get(vertex_index, target(e, g)) << endl;
for (dynamic_properties::const_iterator i = dp.begin(); i != dp.end();
++i)
for (auto& i : dp)
{
if (i->second->key() == typeid(edge_descriptor))
if (i.second->key() == typeid(edge_descriptor))
{
std::string val = print_val<value_types>(*i->second, *e);
std::string val = print_val<value_types>(*i.second, e);
if (val.empty())
continue;
out << " " << i->first << " " << val << endl;
out << " " << i.first << " " << val << endl;
}
}
out << " ]" << endl;
......
src/graph/graph_io.cc
View file @ 8141f5f2
......@@ -304,6 +304,16 @@ struct graph_traits<FakeUndirGraph<Graph> >
typedef typename graph_traits<Graph>::edge_descriptor edge_descriptor;
typedef FakeEdgeIterator<Graph> edge_iterator;
};
template <class Graph>
std::pair<FakeEdgeIterator<Graph>,
FakeEdgeIterator<Graph>> edges(const FakeUndirGraph<Graph>& g)
{
auto e = edges(UndirectedAdaptor<Graph>(g));
return std::make_pair(FakeEdgeIterator<Graph>(e.first),
FakeEdgeIterator<Graph>(e.second));
}
}
......
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